PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009802013.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 373aa    MW: 42333.1 Da    PI: 6.6096
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009802013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83e-1088124541
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                     k+ rr+++NReAAr+sR+RKka++++Le+   +L + 
  XP_009802013.1  88 KVLRRLAQNREAARKSRLRKKAYVQQLENSKLKLIQL 124
                     789*************************865555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-782133No hitNo description
SMARTSM003381.2E-484144IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.85286130IPR004827Basic-leucine zipper domain
PfamPF001701.9E-788119IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-688129No hitNo description
PROSITE patternPS00036091106IPR004827Basic-leucine zipper domain
PfamPF141447.7E-30175249IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MNSSTYTHFV ASRRMGICDS IHQLGMWDDF NGSFPSTSAT MILEVDKCLE DQIPLMEKRL  60
ENETEDTSHG TVGTSNRYEP ETSKPVEKVL RRLAQNREAA RKSRLRKKAY VQQLENSKLK  120
LIQLEQELER ARKQGLYAGG GLDASQLSYS VTASSGTAAF DMEYGHWVEE QTRQTNELRS  180
ALHSQIGEAE LRIIVDGYLS HYFDLFRMKA TAAKADVLYI MSGMWKTSAE RFFMWIGGFR  240
PSELLKVLTP HLELLTEQQL REVCNLTQSC QQAEDALSQG MVKLHQILAE AVAAGRLGEG  300
NYTLPQMGPA IEKLEALVRF VNQADHLRQE TLQQMSRILN TYQAAQGLLA LGEYFERLRV  360
LSSQWATRLR EPT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankX164490.0X16449.1 Tobacco mRNA for TGA1a DNA-binding protein.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009802013.10.0PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A
RefseqXP_016458365.10.0PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A-like
SwissprotP142320.0TGA1A_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-1A
TrEMBLK4BPM00.0K4BPM0_SOLLC; Uncharacterized protein
STRINGSolyc04g011670.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-163bZIP family protein